rs1593325 chr11:107161857 G>T
- Sequence
taagcaaacaacctgaacagacag[G/T]tctcaaaaggcatacaaatgaaca
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 LHSAR (prostate epithelial cells) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN A2NVP9_HUMAN MTOR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.06 | 1.76 | 1.72 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.04 | 1.46 | 1.58 | n/a | No Hit | |||
| A2NVP9_HUMAN | -0.72 | 1.90 | 1.50 | n/a | n/a | |||
| MTOR_HUMAN | -4.74 | 2.76 | 1.50 | n/a | n/a |
Items per page:
1 – 4 of 4