rs160589 chr17:3668569 G>A
- Sequence
gcccagcgccgctccgagaagccg[G/A]cagcagagtacccgcggtcgcgcc
- ASB in cell types
- HepG2 (hepatoblastoma) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN TYY1_HUMAN RBM25_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.77 | n/a | 3.00 | n/a | No Hit | |||
| TYY1_HUMAN | 1.16 | 0.38 | 2.00 | n/a | No Hit | |||
| RBM25_HUMAN | 1.18 | 0.42 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle, Lung, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Thyroid