rs16142 chr7:24285051 A>G
- Sequence
ggtggagcagaggggcaggtcccg[A/G]ccggacggcgcccggagcccgcaa
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) RWPE2
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.16 | 1.34 | 1.52 | -0.83 | Weak Discordant |
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Motif analysis
