rs162279 chr6:8556735 T>G
- Sequence
cccttctttatttcagttattttt[T/G]aagaccattaggttggtgttgttt
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | -0.21 | 1.78 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP fasting blood glucose, major depressive disorder (narrow definition), major depressive disorder (narrow definition) (males), microalbuminuria, rheumatoid arthritis