rs162558 chr2:38076937 T>C
- Sequence
gcaggaggaggcgaatctccgcgc[T/C]ccggcgaactttatcgggttgaag
- ASB in cell types
- A549 (lung carcinoma) GM17942 (lymphoblastoid cell) GM19240 (B cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.04 | 1.53 | 1.00 | n/a | n/a | |||
| RAD21_HUMAN | -0.06 | 1.07 | 1.05 | n/a | n/a |
Items per page:
1 – 2 of 2