rs164138 chr1:162433934 G>A
- Sequence
agcccagggattgtaaacgcacca[G/A]tcagcaccctgtcaaaacagacca
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- NFYC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFYC_HUMAN | 3.19 | -2.99 | 1.00 | 4.15 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellum, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis