rs1657005 chr3:144534110 C>T
- Sequence
gcaaacacgtttttcttcactagg[C/T]ggcaggagagagaagtgtgaacag
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.96 | 2.70 | 2.00 | 2.67 | Concordant |
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Motif analysis
