rs1657290 chr7:155166994 C>T
- Sequence
ttgaggtaggctgctttctccaca[C/T]gcatggacatctttcctatggggt
- ASB in cell types
- K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- ATF3_HUMAN CDN1B_HUMAN CDK8_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 3.56 | 1.50 | n/a | No Hit | |||
| CDN1B_HUMAN | 0.23 | 1.78 | 2.00 | n/a | n/a | |||
| CDK8_HUMAN | -1.81 | 2.11 | 1.50 | n/a | n/a | |||
| JUN_HUMAN | 0.05 | 1.28 | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | n/a | 2.71 | 4.50 | n/a | n/a |
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