ADASTRA v5.1.3
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rs166237
chr19:29872365
G
>
A
Sequence
ccttcgctgatgagcctgaggcgg[G/A]cagcccagccctcccgcccgtagg
ASB in cell types
GM18505 (female B-cells Lymphoblastoid Cell Lines)
GM18486 (Lymphoblastoid Cell Lines)
GM19238 (female B-cells lymphoblastoid cell lines)
spleen
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.63
2.57
1.00
4.3·10
-15
1.57
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)