rs1666481 chr3:190033122 A>G
- Sequence
ttcacaatagcgctcgcgctccta[A/G]gagaatctaatgccactgctgatc
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) GM02630 (Fanconi anemi) GM23338
- ASB for transcription factors
- CTCF_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.02 | -0.29 | 1.21 | n/a | No Hit | |||
| KAISO_HUMAN | n/a | 2.30 | 1.00 | 2.38 | Concordant |
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Motif analysis
