rs16822905 chr2:226906011 G>C
- Sequence
taacagcagaggtttttgagaatc[G/C]ccagtaatttcttaaactcaggct
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.76 | 0.56 | 1.17 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), diastolic blood pressure (dbp), hdl cholesterol, systolic blood pressure (sbp), triglycerides
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Putamen_basal_ganglia, Esophagus_Muscularis, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid