rs168293 chr2:8584172 T>C

Sequence
gacctttcatcattcctaggcctg[T/C]gtataatctttctctcttttacac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.53 1.23 0.891.8·10-3 1.03
K562 (myelogenous leukemia) 0.77 0.01 0.011.00 2.02
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose chronic kidney disease college completion ldl cholesterol
GTEx eQTL Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Kidney_Cortex Liver Minor_Salivary_Gland Pancreas Pituitary Stomach Thyroid Whole_Blood

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