rs16862777 chr2:221490753 G>C

Sequence
ggttataaggaagagtcaacagtt[G/C]ggatgcattacgttttgactctga
ASB in cell types
HEK293T (embryonic kidney)
ASB for transcription factors
PKNX1_HUMAN SCRT2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN n/a 2.63 1.004.3·10-4 2.00 n/a No Hit
SCRT2_HUMAN 2.19 -1.85 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol years of education
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Whole_Blood

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