rs168700 chr5:151239441 G>A
- Sequence
ggtagcggccgccccctcttggcg[G/A]catggatgtactacaggtggttgg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) ascending aorta CD14+ monocytes Peyer's patch
- ASB for transcription factors
- IKZF2_HUMAN STAT1_HUMAN IKZF1_HUMAN TRI22_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -2.88 | 3.20 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.50 | -0.46 | 2.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -2.78 | 2.99 | 1.00 | n/a | No Hit | |||
| TRI22_HUMAN | -2.56 | 2.48 | 1.00 | n/a | n/a |
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