rs16871100 chr6:32894493 A>C
- Sequence
ggaccacggctctgggaccaggaa[A/C]aacgcagactctccagagtcaatg
- ASB in cell types
- primary B-CLL cells 22RV1 (prostate carcinoma) spleen BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ANDR_HUMAN BRD4_HUMAN GCR_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.42 | -1.87 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.60 | 1.02 | 2.67 | n/a | n/a | |||
| GCR_HUMAN | 0.68 | 1.03 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Whole_Blood