rs16871102 chr6:32894512 T>C
- Sequence
aggaaaaacgcagactctccagag[T/C]caatgtctacttcagccagctcaa
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor primary B-CLL cells germinal center B-cells
- ASB for transcription factors
- ANDR_HUMAN ESR1_HUMAN BRD4_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.54 | -0.68 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.77 | -5.29 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 1.88 | 1.04 | 2.67 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Whole_Blood