rs16898440 chr5:69048377 T>A

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.46 2.04 1.003.2·10-32 1.64 0.26 Weak Concordant
STAG1_HUMAN -1.77 1.85 1.001.3·10-6 1.75 n/a n/a
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GRASP birth weight,  body mass index (bmi),  hdl cholesterol change with statins,  height,  ldl cholesterol,  total cholesterol,  triglycerides
GTEx eQTL Prostate

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