ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs169073
chr2:159094440
C
>
T
Sequence
tggttcttgtaggcacagcacctg[C/T]ttgcattctcagtgtgagagtgag
ASB in cell types
22RV1 (prostate carcinoma)
HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
ANDR_HUMAN
TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
3.44
n/a
3.3·10
-4
1.00
2.00
n/a
No Hit
TCF21_HUMAN
1.89
n/a
0.03
1.00
2.50
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hypertension (early onset hypertension)
,
salmonella-induced pyroptosis
,
sporadic creutzfeldt-jakob disease
GTEx eQTL
Artery_Aorta
,
Cells_Cultured_fibroblasts
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)