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rs1692584 chr1:2241478 T>C

Sequence
gcgatctccgctcactgcaagctc[T/C]gtctcccgggttcacgccattctc
ASB in cell types
HT1080 (fibrosarcoma)
ASB for transcription factors
SSRP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSRP1_HUMAN 2.47 n/a 0.011.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Esophagus_Muscularis Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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