rs16938896 chr8:74366245 G>T
- Sequence
tatatttcatggatacttgagttt[G/T]tgcttttaaggtgtttgtttaggg
- ASB in cell types
- THP-1 (acute monocytic leukemia) 22RV1 (prostate carcinoma) GM19238 (female B-cells lymphoblastoid cell lines) HCAEC (human coronary artery endothelial cells)
- ASB for transcription factors
- RAD21_HUMAN STAG1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.86 | 0.23 | 1.95 | n/a | n/a | |||
| STAG1_HUMAN | 0.02 | 1.96 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.17 | -0.49 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Esophagus_Mucosa, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Testis