rs16992555 chr20:47415300 C>T

Sequence
ggtgtttggacacaaaaatcctag[C/T]agctggtgcccctcgcagcagaat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) primary B-CLL cells
ASB for transcription factors
FOXK2_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.82 -4.89 3.2·10-31.00 1.50 n/a n/a
BRD4_HUMAN 1.66 -0.58 0.031.00 2.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose

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