rs169992 chr7:83579996 G>C

Sequence
ttgcttttgctcagtttagtcaac[G/C]aaagcatactctactctgtgccta
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HS-SY-2(Monophasic synovial sarcoma) 1.05 0.18 1.7·10-31.00 1.25
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium crohns disease, combined control dataset, gender differentiated hdl cholesterol total cholesterol
GTEx eQTL Adipose_Subcutaneous Esophagus_Muscularis Heart_Atrial_Appendage Nerve_Tibial Skin_Sun_Exposed_Lower_leg Thyroid

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