rs17014012 chr1:209063080 C>A
- Sequence
caaggcctcctctctctgtttcgg[C/A]ctcttgtggcctaggcctgctatt
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) BJ (fibroblasts)
- ASB for transcription factors
- CTCF_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.05 | n/a | 1.00 | -4.79 | Concordant | |||
| FOXA2_HUMAN | -1.78 | 2.24 | 1.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
