rs17019567 chr1:212682581 A>G

Sequence
gtcttctcaagaatatcataccag[A/G]aaaaggtgatgctagaacagccaa
ASB in cell types
L1236 (Hodgkin lymphoma)
ASB for transcription factors
NFKB2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFKB2_HUMAN -2.34 2.45 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI mosquito bite size
GRASP aortic valve calcium,  ige in plasma,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Testis

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