rs17022799 chr12:94591948 G>A
- Sequence
cctatactagaaaaataactccag[G/A]ggctggataaggctccttgttatc
- ASB in cell types
- LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.61 | -0.26 | 1.20 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, age at death with kuru exposure, birth weight, body mass index (bmi), maternal transmission distortion, rheumatoid arthritis, transmission distortion, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Nerve_Tibial, Thyroid