rs17030125 chr1:112359128 C>T

Sequence
tgtggagatgataagggtgctttc[C/T]tgccccagtgtgaggggagaggga
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.61 0.50 0.050.62 1.19 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  hdl cholesterol change with statins,  ldl cholesterol
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Breast_Mammary_Tissue,  Lung,  Nerve_Tibial

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