rs17034899 chr2:46276833 C>T

Sequence
atgtgatttatgcagagatggttt[C/T]ctccctcagacacttgagcctcat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
PBX2_HUMAN PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX2_HUMAN 2.81 -5.04 0.011.00 2.00 n/a No Hit
PKNX1_HUMAN 2.37 -4.83 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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