rs170508 chr22:45181923 C>T

Sequence
caaagatatttgctgaaaaaacat[C/T]tgtgccatttcagaagctttcaaa
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN -4.73 1.86 1.000.04 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  ldl cholesterol,  microalbuminuria,  urinary albumin-to-creatinine ratio
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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