rs171239 chr3:10739132 T>C

Sequence
tcttccaggggagagacaagtatt[T/C]ctgcccgcccgattccgattccca
ASB in cell types
THP-1 (acute monocytic leukemia) liver heart left ventricle CUTLL1 (T-cell lymphoblastic lymphoma 1)
ASB for transcription factors
RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.71 -0.29 4.8·10-41.00 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence longstanding arthritis rheumatoid arthritis sporadic creutzfeldt-jakob disease taste change in healthy volunteers in response to topiramate treatment (less sweet)
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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