rs17142630 chr6:6857407 A>G
- Sequence
accctccacgcccttggtccatcc[A/G]gaagtactgagtcaacagcccttt
- ASB in cell types
- MDA-MB-468 (breast adenocarcinoma) BEAS-2B (bronchial epithelium) RPMI8226 (Plasma cell myeloma) K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN GCR_HUMAN STAT1_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | n/a | 2.17 | 2.50 | n/a | No Hit | |||
| GCR_HUMAN | 0.19 | 1.93 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.29 | -0.59 | 3.00 | n/a | No Hit | |||
| ESR1_HUMAN | 2.51 | 0.51 | 1.50 | n/a | No Hit |
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