rs17163149 chr7:90764971 C>T

Sequence
cagagaataaggtagaagtcattc[C/T]taattggcctgatgggtgagacag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN ZN687_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -2.34 2.06 1.004.7·10-3 1.00 n/a n/a
ZN687_HUMAN n/a 2.49 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp) height ldl cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Mucosa

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