rs171780 chr5:16627016 C>G
- Sequence
gaagacctgggccacatggaaaaa[C/G]tgttgcaactgataccaaagtttg
- ASB in cell types
- JB6 (Human anaplastic large cell lymphoma) SU-DHL-1 (Anaplastic large cell lymphoma) EOL-1 (Acute myeloid leukemia) breast tumor
- ASB for transcription factors
- CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 0.20 | 1.90 | 1.69 | 0.85 | Weak Concordant |
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Motif analysis
