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rs171786 chr16:58727546 A>C

Sequence
acaatcccttaccacctgactagt[A/C]cactgtggtgatcagcagagatct
ASB for transcription factors
ANDR_HUMAN ZN449_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.59 -0.28 1.5·10-30.96 3.60 n/a No Hit
ZN449_HUMAN 2.69 -4.93 0.031.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP homa-ir ldl cholesterol maternal transmission distortion total cholesterol transmission distortion
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Nucleus_accumbens_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Kidney_Cortex Lung Muscle_Skeletal Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid Whole_Blood

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