rs171820 chr5:5979840 T>C
- Sequence
tatctcctggtcatctctgatttc[T/C]atctcctagtgcaaattcttcatg
- ASB in cell types
- endometrial stromal cells
- ASB for transcription factors
- GATA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | 2.11 | -4.57 | 2.00 | -5.01 | Concordant |
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Motif analysis
