rs1719622 chr3:190033096 A>T
- Sequence
ggaacctagatcccccacatgcaa[A/T]gttcacaatagcgctcgcgctcct
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) GM12892 (female B-cells lymphoblastoid cell line) GM23338
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.55 | -0.40 | 1.32 | n/a | No Hit |
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