ADASTRA v5.1.3
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Bill Cipher
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rs172550
chr7:83579598
T
>
A
Sequence
acatggtaaaaagtaaggaaaaag[T/A]aaatgttattagcaatgctaggtc
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HS-SY-2(Monophasic synovial sarcoma)
1.07
0.46
0.04
0.91
1.22
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
hdl cholesterol
,
total cholesterol
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale