rs1730190 chr7:155166950 C>T
- Sequence
gtcacgctgcctgcatcctgcacg[C/T]ggccctgtgctctgcatgtttgag
- ASB in cell types
- K562 (myelogenous leukemia) MOLM14 (Adult acute myeloid leukemia) SK-N-SH (neuroblastoma) LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- ATF3_HUMAN CDK8_HUMAN MNT_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | n/a | 4.39 | 1.50 | n/a | No Hit | |||
| CDK8_HUMAN | -4.08 | 2.27 | 1.50 | n/a | n/a | |||
| MNT_HUMAN | n/a | 3.34 | 4.50 | n/a | n/a | |||
| ZFX_HUMAN | -0.13 | 2.29 | 1.69 | n/a | No Hit | |||
| JUN_HUMAN | -2.84 | 1.21 | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 14
Motif analysis
