ADASTRA v5.1.3
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rs173499
chr5:143032770
T
>
C
Sequence
aataataaaaccgttgttaattat[T/C]agtaatctaatcagcaggaaactc
ASB in cell types
WA01 (H1, human embryonic stem cells)
ASB for transcription factors
DUX4_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN
-1.58
1.83
1.00
6.8·10
-3
1.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
,
Spleen
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)