rs17356504 chr12:95623747 A>G
- Sequence
caaacctcctcaagcagcccaatg[A/G]ccagacaccgcagcgtcgcctcta
- ASB in cell types
- CD34+ stem cells-derived erythroblasts MCF7 (Invasive ductal breast carcinoma) erythroid progenitors T47D (invasive ductal carcinoma)
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.41 | 0.03 | 1.10 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, asthma, eye color, ldl cholesterol, urinary albumin-to-creatinine ratio