rs17366761 chr5:95858982 C>T
- Sequence
atgagcagtcgggaagtgggtctg[C/T]gcgcaccccgctgcagctgtggca
- ASB in cell types
- CD14+ monocytes 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line) K562 (myelogenous leukemia)
- ASB for transcription factors
- STAT1_HUMAN STAG1_HUMAN ANDR_HUMAN BRD2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.17 | 0.79 | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | -0.18 | 0.26 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.35 | -0.11 | 1.57 | n/a | No Hit | |||
| BRD2_HUMAN | 1.96 | 0.66 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood