rs17370337 chr1:47382705 G>A
- Sequence
gatgagagtaaaaccatttgtata[G/A]agaagcaggattttgttccatcta
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN HDAC1_HUMAN IKZF1_HUMAN RHG35_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 2.34 | -2.10 | 1.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.98 | -1.17 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 1.86 | -0.08 | 1.25 | n/a | No Hit | |||
| RHG35_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid