rs17373053 chr3:152511971 T>A
- Sequence
tatgcgatcattaagtatgcattg[T/A]atgtctactagtgttcatgatggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN IKZF2_HUMAN ATF7_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.35 | 0.04 | 1.05 | n/a | No Hit | |||
| STAG1_HUMAN | 1.64 | 0.53 | 1.06 | n/a | n/a | |||
| IKZF2_HUMAN | 1.74 | 0.13 | 1.00 | n/a | n/a | |||
| ATF7_HUMAN | 2.33 | -2.17 | 1.00 | n/a | n/a |
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