rs1741341 chr20:4129521 T>C

Sequence
ctaacggctctgcctcttgcccaa[T/C]tttcagaaaggagcatctgaagtg
ASB in cell types
MOLM14 (Adult acute myeloid leukemia)
ASB for transcription factors
CDK8_HUMAN CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CDK8_HUMAN -0.68 1.71 1.001.4·10-3 1.00 n/a n/a
CEBPB_HUMAN 0.80 1.53 1.000.05 1.75 -0.19 Weak Discordant
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Motif analysis

CEBPB_HUMAN Weak Discordant
CEBPB_HUMAN pic

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic

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