rs17422368 chr4:37472120 G>A
- Sequence
ggaaatggggaagctgcatactgc[G/A]tgtgcccctggcaggcattggcta
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) THP-1 (acute monocytic leukemia) macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN ESR1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.66 | 0.09 | 1.54 | n/a | No Hit | |||
| ESR1_HUMAN | 0.19 | 0.97 | 2.05 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.10 | 1.17 | 2.00 | n/a | No Hit |
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