rs17423659 chr1:5286438 C>G
- Sequence
ttcttccatcctatgtgccaaagt[C/G]acagtgggccagcagagggcacac
- ASB in cell types
- foreskin keratinocyte neural cell bipolar neuron neural progenitors
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.94 | 1.46 | 1.43 | n/a | No Hit | |||
| STAG1_HUMAN | 0.33 | 1.85 | 1.80 | n/a | n/a | |||
| SMC3_HUMAN | -2.34 | 2.29 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3