rs17434855 chr2:73828570 T>C
- Sequence
ttgcctaatatctaagactaccaa[T/C]ttttgtgtagaatgtaatacaagc
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.08 | 0.75 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, microalbuminuria, obesity with early age of onset (age >2), serum creatinine, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Heart_Atrial_Appendage, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood