rs174634 chr11:61879915 G>C
- Sequence
ccctgggaggggagggcaggctca[G/C]ccctggctctgcatccccttgggc
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.06 | -2.03 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP fasting blood glucose, hdl cholesterol, homa-b, ldl cholesterol, ldl cholesterol change with statins, microalbuminuria, obesity with early age of onset (age >2), plasma alpha-linolenic acid levels, plasma docosapentaenoic acid levels, plasma eicosapentaenoic acid levels, rheumatoid arthritis, total cholesterol, total cholesterol change with statins, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood