rs17477053 chr1:167563707 G>A

Sequence
gaaagtgcatatgttggcagtaat[G/A]tttggcaatagtggaggtccagtt
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.08 -1.31 3.9·10-51.00 3.00 n/a No Hit
SPI1_HUMAN 1.41 0.89 0.021.00 1.69 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  diastolic blood pressure (dbp),  total cholesterol

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