rs17502518 chr1:39171138 C>T

Sequence
gaagtcccatttgaatttaacaga[C/T]gttgggacttgtctgcgttccttt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.07 n/a 3.8·10-31.00 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  diastolic blood pressure (dbp),  hdl cholesterol,  ldl cholesterol,  microalbuminuria,  mitral annular calcium
GTEx eQTL Adipose_Subcutaneous,  Heart_Left_Ventricle,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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