rs1755347 chr1:16727384 T>C
- Sequence
gtacttcttcatttcattatggcc[T/C]tttacccgtcttttacgctgcaaa
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) Reh (ATCC CRL-8286)
- ASB for transcription factors
- ZEB2_HUMAN ZN184_HUMAN ZF69B_HUMAN ZBT20_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZEB2_HUMAN | n/a | 3.11 | 2.00 | n/a | n/a | |||
| ZN184_HUMAN | n/a | 2.87 | 2.00 | n/a | n/a | |||
| ZF69B_HUMAN | n/a | 3.85 | 2.00 | n/a | n/a | |||
| ZBT20_HUMAN | n/a | 3.38 | 2.00 | n/a | n/a | |||
| FEZF1_HUMAN | n/a | 2.48 | 2.00 | -2.70 | Discordant |
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Motif analysis
